Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs72563849 chr6:148656200 G/A 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs72563854 chr6:148667492 A/G 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs72563855 chr6:148667683 T/G 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs72563856 chr6:148668161 C/T 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs7257118 chr19:48959642 A/G 2.05E-6 289 15.88 21.37 26.7 KM Plot
KIRP rs72633968 chr5:74753634 A/G 2.54E-5 286 25.67 24.38 12 KM Plot
KIRP rs72708829 chr14:103797113 A/G 7.21E-5 277 23.6 30.75 16.27 KM Plot
KIRP rs72714967 chr1:161291228 C/T 2.85E-7 286 26.4 21.28 8.03 KM Plot
KIRP rs72714978 chr1:161302354 A/G 2.89E-7 286 26.38 22.17 8.03 KM Plot
KIRP rs72714988 chr1:161334023 G/C 2.91E-7 286 26.38 23.63 8.03 KM Plot
KIRP rs72714996 chr1:161374604 G/A 2.69E-7 287 26.48 21.28 8.03 KM Plot
KIRP rs72826951 chr2:108616284 T/C 0.000102 279 23.4 38.03 11.43 KM Plot
KIRP rs7283597 chr21:44239917 A/T 0.000203 285 25.58 34.28 13.07 KM Plot
KIRP rs72839445 chr6:27249686 G/A 1.49E-8 288 25.57 29.43 9.77 KM Plot
KIRP rs72839477 chr6:27327000 C/T 1.88E-8 287 25.58 27.78 9.77 KM Plot